Cell Painting Feature Extraction Pipeline

Getting started

  • Neurofibromatosis type 1 (NF1) 3D organoid image-based profiling pipeline
  • Python scientific stack

Features

  • Area.size.shape features
  • Colocalization features
  • Granularity features
  • Intensity features
  • Neighbors features
  • Texture features
  • SAM-med3d features
  • CHAMMI-75 features

API reference

  • API Reference
Cell Painting Feature Extraction Pipeline
  • Search

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